# Create ToxPi Prioritization Models

## Documentation for package ‘toxpiR’ version 1.3.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

as.data.frame-method | ToxPi Result
as.TxpModelList | List of TxpModel objects
as.TxpResultList | List of TxpResult objects
as.TxpSliceList | List of TxpSlice objects
as.TxpTransFuncList | List of TxpTransFunc objects
boxLegendGrob | Create a filled-box legend
duplicated-method | List of TxpModel objects
duplicated-method | List of TxpResult objects
duplicated-method | List of TxpSlice objects
grid.pieGridGrob | Make grid of pieGrobs
grid.pieGrob | Create a pie grob
length-method | ToxPi Model
length-method | ToxPi Result
length-method | ToxPi Slice
merge-method | ToxPi Model
merge-method | ToxPi Slice
names-method | ToxPi Model
names-method | ToxPi Result
names<--method | ToxPi Model
names<--method | ToxPi Result
pieGridGrob | Make grid of pieGrobs
pieGrob | Create a pie grob
plot | Plot TxpResult objects
plot-method | Plot TxpResult objects
sort-method | ToxPi Result
toxpiR-datasets | toxpiR data objects
txpCalculateScores | Calculate ToxPi Scores for the given model and input data
txpCalculateScores-method | Calculate ToxPi Scores for the given model and input data
txpExportGui | Export comma-separated file intended for ToxPi GUI
txpGenerics | toxpiR package generics
txpIDs | toxpiR package generics
txpIDs-method | ToxPi Result
txpIDs<- | toxpiR package generics
txpIDs<--method | ToxPi Result
txpImportGui | Import data file generated by ToxPi GUI
txpMissing | toxpiR package generics
txpMissing-method | ToxPi Result
TxpModel | ToxPi Model
txpModel | toxpiR package generics
TxpModel-class | ToxPi Model
txpModel-method | ToxPi Result
TxpModel-txpSlices | ToxPi Model
TxpModelList | List of TxpModel objects
TxpModelList-class | List of TxpModel objects
txpRanks | toxpiR package generics
txpRanks-method | ToxPi Result
TxpResult | ToxPi Result
TxpResult-class | ToxPi Result
TxpResult-plot | Plot TxpResult objects
TxpResultList | List of TxpResult objects
TxpResultList-class | List of TxpResult objects
TxpResultParam | ToxPi Result Parameters
txpResultParam | toxpiR package generics
TxpResultParam-class | ToxPi Result Parameters
txpResultParam-method | ToxPi Result
txpScores | toxpiR package generics
txpScores-method | ToxPi Result
TxpSlice | ToxPi Slice
TxpSlice-class | ToxPi Slice
TxpSliceList | List of TxpSlice objects
TxpSliceList-class | List of TxpSlice objects
txpSlices | toxpiR package generics
txpSlices-method | ToxPi Model
txpSlices-method | ToxPi Result
txpSlices<- | toxpiR package generics
txpSlices<--method | ToxPi Model
txpSliceScores | toxpiR package generics
txpSliceScores-method | ToxPi Result
TxpTransFunc | Numeric transformation function
TxpTransFunc-class | Numeric transformation function
TxpTransFuncList | List of TxpTransFunc objects
TxpTransFuncList-class | List of TxpTransFunc objects
txpTransFuncs | toxpiR package generics
txpTransFuncs-method | ToxPi Model
txpTransFuncs-method | ToxPi Result
txpTransFuncs-method | ToxPi Slice
txpTransFuncs-method | List of TxpSlice objects
txpTransFuncs<- | toxpiR package generics
txpTransFuncs<--method | ToxPi Model
txpTransFuncs<--method | ToxPi Slice
txpValueNames | toxpiR package generics
txpValueNames-method | ToxPi Model
txpValueNames-method | ToxPi Result
txpValueNames-method | ToxPi Slice
txpValueNames-method | List of TxpSlice objects
txpValueNames<- | toxpiR package generics
txpValueNames<--method | ToxPi Slice
txpWeights | toxpiR package generics
txpWeights-method | ToxPi Model
txpWeights-method | ToxPi Result
txpWeights<- | toxpiR package generics
txpWeights<--method | ToxPi Model
txp_example_input | toxpiR data objects
txp_example_model | toxpiR data objects
[-method | ToxPi Result