Last updated on 2025-11-26 01:50:10 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.71 | 226.48 | 237.19 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 22.00 | 251.00 | 273.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 24.00 | 306.00 | 330.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 226.00 | 249.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/179s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.811, system: 0.089, elapsed: 2.796 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.117, system: 0.297, elapsed: 19.476 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.019, elapsed: 0.344 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.328, system: 0.371, elapsed: 8.252 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.222, system: 0.823, elapsed: 32.213 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.057, elapsed: 2.421 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.882, system: 0.219, elapsed: 22.260 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.021, elapsed: 0.559 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.196, system: 0.278, elapsed: 8.924 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.007, elapsed: 0.353 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.755, system: 0.797, elapsed: 36.074 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.922, system: 0.094, elapsed: 4.749 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.985, system: 0.246, elapsed: 20.838 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.020, elapsed: 0.475 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.126, system: 0.252, elapsed: 8.248 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.277 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.282, system: 0.272, elapsed: 1.574 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.385, system: 0.936, elapsed: 37.525 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.097, elapsed: 3.626 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.212, system: 0.369, elapsed: 23.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.029, elapsed: 0.415 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.437, system: 0.374, elapsed: 8.003 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.250 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.500, system: 0.796, elapsed: 22.900 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.006, system: 1.765, elapsed: 60.272 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [95s/223s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.890, system: 0.131, elapsed: 4.612 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.132, system: 0.346, elapsed: 27.100 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.032, elapsed: 0.767 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.342, system: 0.476, elapsed: 10.910 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.016, elapsed: 0.353 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.499, system: 1.484, elapsed: 46.707 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.890, system: 0.100, elapsed: 4.152 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.991, system: 0.297, elapsed: 23.558 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.035, elapsed: 0.371 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.348, system: 0.509, elapsed: 13.549 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.012, elapsed: 0.577 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.379, system: 1.492, elapsed: 45.282 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.772, system: 0.090, elapsed: 3.945 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.075, system: 0.315, elapsed: 25.238 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.030, elapsed: 0.411 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.064, system: 0.334, elapsed: 9.546 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.016, elapsed: 0.384 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.218, system: 0.378, elapsed: 2.136 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.331, system: 1.525, elapsed: 44.084 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.815, system: 0.086, elapsed: 4.224 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.070, system: 0.365, elapsed: 25.632 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.031, elapsed: 0.416 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.209, system: 0.506, elapsed: 11.542 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.007, elapsed: 0.479 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.514, system: 0.948, elapsed: 28.448 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.836, system: 2.375, elapsed: 74.171 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64